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CUCUME——

———RNA Methylation, Long Distance Mobility

Download
Species File
Pumpkin Genome information
Pumpkin mobile RNAs.xlsx
Pumpkin tRNA-Like-Structure sequence.txt
Pumpkin Adult plant m5C.xlsx Pumpkin Adult plant m6A.xlsx
Pumpkin Vascular exudation m5C.xlsx Pumpkin Vascular exudation m6A.xlsx
Motifs matrix file
CmGm5C_dreme.txt CmGm6A_dreme.txt
CmVm5C_dreme.txt CmVm6A_dreme.txt
mRNAs haboring the motifs
CmGm5C_motif_peak_info.txt CmGm6A_motif_peak_info.txt
CmVm5C_motif_peak_info.txt CmVm6A_motif_peak_info.txt
Cucumber Genome information
Cucumber GWAS SNP.xlsx
Cucumber mobile RNAs.xlsx
Cucumber QTLs.xlsx
Cucumber tRNA-Like-Structure sequence.txt
Cucumber Adult plant m5C.xlsx Cucumber Adult plant m6A.xlsx
Cucumber Vascular exudation m5C.xlsx Cucumber Vascular exudation m6A.xlsx
Motifs matrix file
CsGm5C_dreme.txt CsGm6A_dreme.txt
CsVm5C_dreme.txt CsVm6A_dreme.txt
mRNAs haboring the motifs
CsGm5C_motif_peak_info.txt CsGm6A_motif_peak_info.txt
CsVm5C_motif_peak_info.txt CsVm6A_motif_peak_info.txt
Raw Data
Pumpkin name Pumpkin_Gm5C Pumpkin_Vm5C Pumpkin_Gm6A Pumpkin_Vm6A
GSA accession CRA009383 CRA009384 CRA009385 CRA009386
Cucumber name Cucumber_Gm5C Cucumber_Vm5C Cucumber_Gm6A Cucumber_Vm6A
GSA accession CRA009362 CRA009360 CRA009366 CRA009367

You can use the corresponding accession to download the Raw Data of MeRIP-seq in the Genome Sequence Archive (https://ngdc.cncb.ac.cn/gsa/) database.

CUCUME is developed by Zhanglab and Hanlab
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